Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd3Q8CIK8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rfwd3Q8CIK8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd3Q8CIK8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Gm33142-201ENSMUST00000193913 867 ntBASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms