Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab11fip3Q8CHD8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab11fip3Q8CHD8 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab11fip3Q8CHD8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Mir5131-201ENSMUST00000175426 93 ntBASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Gm6089-201ENSMUST00000197666 938 ntBASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.89■□□□□ 0.93
Rab11fip3Q8CHD8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Gm11780-201ENSMUST00000136880 516 ntBASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip3Q8CHD8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms