Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab43Q8CG50 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.78■□□□□ 0.12
Rab43Q8CG50 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Gm8097-201ENSMUST00000117903 829 ntBASIC15.78■□□□□ 0.12
Rab43Q8CG50 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.78■□□□□ 0.12
Rab43Q8CG50 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab43Q8CG50 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab43Q8CG50 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.77■□□□□ 0.12
Rab43Q8CG50 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab43Q8CG50 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Gm2213-201ENSMUST00000197485 688 ntBASIC15.77■□□□□ 0.12
Rab43Q8CG50 Gm8655-201ENSMUST00000221159 852 ntBASIC15.77■□□□□ 0.12
Rab43Q8CG50 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab43Q8CG50 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab43Q8CG50 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.76■□□□□ 0.11
Rab43Q8CG50 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rab43Q8CG50 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.75■□□□□ 0.11
Rab43Q8CG50 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Gm25406-201ENSMUST00000157599 105 ntBASIC15.75■□□□□ 0.11
Rab43Q8CG50 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.75■□□□□ 0.11
Rab43Q8CG50 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Rab43Q8CG50 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab43Q8CG50 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms