Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc178Q8CDV0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc178Q8CDV0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc178Q8CDV0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc178Q8CDV0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc178Q8CDV0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms