Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Phf7-203ENSMUST00000226565 1971 ntBASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lysmd4Q8CC84 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lysmd4Q8CC84 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Gm20760-201ENSMUST00000179197 648 ntBASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lysmd4Q8CC84 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Gm44450-201ENSMUST00000199528 114 ntBASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Gm18115-201ENSMUST00000221209 621 ntBASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lysmd4Q8CC84 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms