Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm27646-201ENSMUST00000183989 110 ntBASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Gm20949-201ENSMUST00000206478 952 ntBASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rtp1Q8C8C1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtp1Q8C8C1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp1Q8C8C1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.39■□□□□ 0.54
Rtp1Q8C8C1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
Rtp1Q8C8C1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Gm27300-201ENSMUST00000184085 97 ntBASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Gm27335-201ENSMUST00000184758 97 ntBASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtp1Q8C8C1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp1Q8C8C1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Gm45167-201ENSMUST00000208007 322 ntBASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms