Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim47Q8C0E3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.94■□□□□ 0.46
Trim47Q8C0E3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim47Q8C0E3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Gm43347-201ENSMUST00000200226 580 ntBASIC17.93■□□□□ 0.46
Trim47Q8C0E3 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim47Q8C0E3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim47Q8C0E3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim47Q8C0E3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Gm25745-201ENSMUST00000174945 133 ntBASIC17.9■□□□□ 0.46
Trim47Q8C0E3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim47Q8C0E3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim47Q8C0E3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim47Q8C0E3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.89■□□□□ 0.45
Trim47Q8C0E3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim47Q8C0E3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms