Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Gm28439-201ENSMUST00000187714 876 ntBASIC16.93■□□□□ 0.3
Trim35Q8C006 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.93■□□□□ 0.3
Trim35Q8C006 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim35Q8C006 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim35Q8C006 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim35Q8C006 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm12601-201ENSMUST00000118994 846 ntBASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm15225-201ENSMUST00000120449 1017 ntBASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm13559-201ENSMUST00000120476 863 ntBASIC16.92■□□□□ 0.3
Trim35Q8C006 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm18717-201ENSMUST00000192744 1241 ntBASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm44061-201ENSMUST00000203962 1195 ntBASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim35Q8C006 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Gm45114-201ENSMUST00000208280 1349 ntBASIC16.92■□□□□ 0.3
Trim35Q8C006 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim35Q8C006 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim35Q8C006 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm14975-201ENSMUST00000118741 664 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm11539-201ENSMUST00000119837 557 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm13436-201ENSMUST00000120418 567 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm27039-201ENSMUST00000182438 962 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim35Q8C006 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim35Q8C006 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim35Q8C006 AC116724.1-201ENSMUST00000227900 972 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim35Q8C006 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.91■□□□□ 0.3
Trim35Q8C006 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim35Q8C006 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim35Q8C006 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim35Q8C006 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms