Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf7Q8BTV2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpsf7Q8BTV2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf7Q8BTV2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf7Q8BTV2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Mir1199-201ENSMUST00000117015 119 ntBASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf7Q8BTV2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf7Q8BTV2 Gm715-201ENSMUST00000117865 831 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms