Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ppp1r3eQ8BRJ4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.18■□□□□ 0.02
Ppp1r3eQ8BRJ4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Mir1199-201ENSMUST00000117015 119 ntBASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ppp1r3eQ8BRJ4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms