Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Gm27357-201ENSMUST00000183754 135 ntBASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip4Q8BQP8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rab11fip4Q8BQP8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rab11fip4Q8BQP8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Gm7153-201ENSMUST00000117092 455 ntBASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rab11fip4Q8BQP8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab11fip4Q8BQP8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab11fip4Q8BQP8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms