Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smco3Q8BQM7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smco3Q8BQM7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smco3Q8BQM7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Prob1-201ENSMUST00000097619 3021 ntBASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco3Q8BQM7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms