Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sfr1Q8BP27 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Gm27742-201ENSMUST00000184667 60 ntBASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Gm44430-201ENSMUST00000203376 995 ntBASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sfr1Q8BP27 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sfr1Q8BP27 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sfr1Q8BP27 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sfr1Q8BP27 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sfr1Q8BP27 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sfr1Q8BP27 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms