Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tcaf1Q8BNE1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tcaf1Q8BNE1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tcaf1Q8BNE1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tcaf1Q8BNE1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tcaf1Q8BNE1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Gm12644-201ENSMUST00000119935 606 ntBASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Gm27741-201ENSMUST00000185060 237 ntBASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcaf1Q8BNE1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcaf1Q8BNE1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Tcaf1Q8BNE1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Gm27459-201ENSMUST00000184860 107 ntBASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Tcaf1Q8BNE1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Mir6404-201ENSMUST00000183699 94 ntBASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tcaf1Q8BNE1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcaf1Q8BNE1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcaf1Q8BNE1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcaf1Q8BNE1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms