Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.12■□□□□ 0.01
Scn3bQ8BHK2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3bQ8BHK2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Gm11249-201ENSMUST00000117071 859 ntBASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Gm37292-201ENSMUST00000192062 758 ntBASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3bQ8BHK2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms