Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Dio3-201ENSMUST00000097228 1449 ntBASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc5a7Q8BGY9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Gm37292-201ENSMUST00000192062 758 ntBASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc5a7Q8BGY9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc5a7Q8BGY9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc5a7Q8BGY9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc5a7Q8BGY9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.22□□□□□ -0.13
Slc5a7Q8BGY9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc5a7Q8BGY9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc5a7Q8BGY9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc5a7Q8BGY9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms