Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Asic1-205ENSMUST00000228185 1818 ntBASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim6Q8BGE7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.22■□□□□ 0.35
Trim6Q8BGE7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim6Q8BGE7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Trim6Q8BGE7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim6Q8BGE7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim6Q8BGE7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim6Q8BGE7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Gm7791-201ENSMUST00000219066 539 ntBASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms