Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npas4Q8BGD7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Gm10175-201ENSMUST00000086013 645 ntBASIC17.02■□□□□ 0.32
Npas4Q8BGD7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Npas4Q8BGD7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Gm5682-201ENSMUST00000173402 505 ntBASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Mir3113-201ENSMUST00000175478 76 ntBASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Mir8117-201ENSMUST00000184773 107 ntBASIC17.01■□□□□ 0.31
Npas4Q8BGD7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npas4Q8BGD7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17■□□□□ 0.31
Npas4Q8BGD7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Gm11873-201ENSMUST00000117877 1304 ntBASIC17■□□□□ 0.31
Npas4Q8BGD7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17■□□□□ 0.31
Npas4Q8BGD7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Npas4Q8BGD7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Gm25911-201ENSMUST00000157621 56 ntBASIC17■□□□□ 0.31
Npas4Q8BGD7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Npas4Q8BGD7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17■□□□□ 0.31
Npas4Q8BGD7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Npas4Q8BGD7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17■□□□□ 0.31
Npas4Q8BGD7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17■□□□□ 0.31
Npas4Q8BGD7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npas4Q8BGD7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npas4Q8BGD7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Npas4Q8BGD7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npas4Q8BGD7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npas4Q8BGD7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms