Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Gm9682-201ENSMUST00000197505 556 ntBASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Gm45612-201ENSMUST00000211320 160 ntBASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trnp1Q80ZI1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trnp1Q80ZI1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Gm18489-201ENSMUST00000172565 551 ntBASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trnp1Q80ZI1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Gm20949-201ENSMUST00000206478 952 ntBASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trnp1Q80ZI1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Gm15427-201ENSMUST00000117288 531 ntBASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms