Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Gm13186-201ENSMUST00000118031 316 ntBASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3bQ80YF6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3bQ80YF6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3bQ80YF6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3bQ80YF6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3bQ80YF6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3bQ80YF6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3bQ80YF6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3bQ80YF6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Upk3bQ80YF6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Gm18115-201ENSMUST00000221209 621 ntBASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3bQ80YF6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Prob1-201ENSMUST00000097619 3021 ntBASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms