Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Gm9731-201ENSMUST00000209480 747 ntBASIC15.67■□□□□ 0.1
Trim36Q80WG7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim36Q80WG7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim36Q80WG7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Trim36Q80WG7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Gm7791-201ENSMUST00000219066 539 ntBASIC15.66■□□□□ 0.1
Trim36Q80WG7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim36Q80WG7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Il3ra-202ENSMUST00000223589 738 ntBASIC15.65■□□□□ 0.1
Trim36Q80WG7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim36Q80WG7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim36Q80WG7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Gm23634-201ENSMUST00000175071 91 ntBASIC15.64■□□□□ 0.09
Trim36Q80WG7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms