Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Gm6736-201ENSMUST00000166583 948 ntBASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3tc2Q80VA5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Psmb5-202ENSMUST00000227257 622 ntBASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3tc2Q80VA5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Gm15173-201ENSMUST00000122049 433 ntBASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Gm12260-201ENSMUST00000122447 411 ntBASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Gm25745-201ENSMUST00000174945 133 ntBASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3tc2Q80VA5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3tc2Q80VA5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.58■□□□□ 0.41
Sh3tc2Q80VA5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3tc2Q80VA5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3tc2Q80VA5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3tc2Q80VA5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Gm13418-201ENSMUST00000119097 944 ntBASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms