Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh8Q7TSK3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh8Q7TSK3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh8Q7TSK3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh8Q7TSK3 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.96■□□□□ 0.14
Pcdh8Q7TSK3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh8Q7TSK3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Gm44454-201ENSMUST00000198541 138 ntBASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh8Q7TSK3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Gm15165-201ENSMUST00000118140 502 ntBASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Gm27867-201ENSMUST00000184778 125 ntBASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdh8Q7TSK3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms