Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sned1Q70E20 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sned1Q70E20 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Sned1Q70E20 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sned1Q70E20 Gm7774-201ENSMUST00000200064 533 ntBASIC19.51■□□□□ 0.71
Sned1Q70E20 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.5■□□□□ 0.71
Sned1Q70E20 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sned1Q70E20 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Sned1Q70E20 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sned1Q70E20 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.5■□□□□ 0.71
Sned1Q70E20 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.5■□□□□ 0.71
Sned1Q70E20 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.5■□□□□ 0.71
Sned1Q70E20 Gm10253-201ENSMUST00000194270 940 ntBASIC19.5■□□□□ 0.71
Sned1Q70E20 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.5■□□□□ 0.71
Sned1Q70E20 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sned1Q70E20 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sned1Q70E20 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.49■□□□□ 0.71
Sned1Q70E20 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sned1Q70E20 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sned1Q70E20 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sned1Q70E20 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sned1Q70E20 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sned1Q70E20 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.49■□□□□ 0.71
Sned1Q70E20 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sned1Q70E20 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sned1Q70E20 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.49■□□□□ 0.71
Sned1Q70E20 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sned1Q70E20 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sned1Q70E20 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Sned1Q70E20 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sned1Q70E20 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sned1Q70E20 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.48■□□□□ 0.71
Sned1Q70E20 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.48■□□□□ 0.71
Sned1Q70E20 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.48■□□□□ 0.71
Sned1Q70E20 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.48■□□□□ 0.71
Sned1Q70E20 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.48■□□□□ 0.71
Sned1Q70E20 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sned1Q70E20 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sned1Q70E20 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Sned1Q70E20 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sned1Q70E20 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.47■□□□□ 0.71
Sned1Q70E20 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Sned1Q70E20 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.47■□□□□ 0.71
Sned1Q70E20 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sned1Q70E20 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sned1Q70E20 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sned1Q70E20 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sned1Q70E20 Gm5866-201ENSMUST00000177881 973 ntBASIC19.46■□□□□ 0.71
Sned1Q70E20 Gm43767-201ENSMUST00000198933 381 ntBASIC19.46■□□□□ 0.71
Sned1Q70E20 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sned1Q70E20 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms