Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm8Q6ZWM4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm8Q6ZWM4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lsm8Q6ZWM4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Gm15794-201ENSMUST00000120182 631 ntBASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm8Q6ZWM4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Lsm8Q6ZWM4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lsm8Q6ZWM4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm8Q6ZWM4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm8Q6ZWM4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm8Q6ZWM4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.97■□□□□ 0.31
Lsm8Q6ZWM4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm8Q6ZWM4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms