Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Gm5177-201ENSMUST00000183092 997 ntBASIC13.62□□□□□ -0.23
Rif1Q6PR54 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm13597-201ENSMUST00000121239 375 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm5779-201ENSMUST00000218467 910 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm9257-201ENSMUST00000221254 232 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Mir8102-201ENSMUST00000184148 139 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.61□□□□□ -0.23
Rif1Q6PR54 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rif1Q6PR54 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.6□□□□□ -0.23
Rif1Q6PR54 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Gm27300-201ENSMUST00000184085 97 ntBASIC13.6□□□□□ -0.23
Rif1Q6PR54 Gm27335-201ENSMUST00000184758 97 ntBASIC13.6□□□□□ -0.23
Rif1Q6PR54 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.6□□□□□ -0.23
Rif1Q6PR54 Gm6180-201ENSMUST00000065243 498 ntBASIC13.6□□□□□ -0.23
Rif1Q6PR54 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rif1Q6PR54 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.59□□□□□ -0.23
Rif1Q6PR54 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.59□□□□□ -0.23
Rif1Q6PR54 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.59□□□□□ -0.23
Rif1Q6PR54 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.59□□□□□ -0.23
Rif1Q6PR54 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.59□□□□□ -0.23
Rif1Q6PR54 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Gm29707-201ENSMUST00000196325 491 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms