Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtifQ6PEE2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CtifQ6PEE2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtifQ6PEE2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.35■□□□□ 0.37
CtifQ6PEE2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CtifQ6PEE2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.34■□□□□ 0.37
CtifQ6PEE2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtifQ6PEE2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CtifQ6PEE2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.33■□□□□ 0.36
CtifQ6PEE2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CtifQ6PEE2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.32■□□□□ 0.36
CtifQ6PEE2 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.32■□□□□ 0.36
CtifQ6PEE2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtifQ6PEE2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CtifQ6PEE2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.31■□□□□ 0.36
CtifQ6PEE2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtifQ6PEE2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms