Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PdgfrlQ6PE55 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Gm12260-201ENSMUST00000122447 411 ntBASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PdgfrlQ6PE55 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Gm27628-201ENSMUST00000184911 107 ntBASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.65■□□□□ 0.26
PdgfrlQ6PE55 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.64■□□□□ 0.26
PdgfrlQ6PE55 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PdgfrlQ6PE55 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Gm18622-201ENSMUST00000219361 595 ntBASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrlQ6PE55 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm8825-201ENSMUST00000182565 998 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm4518-201ENSMUST00000182638 718 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PdgfrlQ6PE55 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms