Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp50Q6P8X6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.64■□□□□ 0.58
Usp50Q6P8X6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp50Q6P8X6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp50Q6P8X6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp50Q6P8X6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp50Q6P8X6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp50Q6P8X6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.62■□□□□ 0.57
Usp50Q6P8X6 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp50Q6P8X6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Mir8098-201ENSMUST00000184011 137 ntBASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Gm28659-201ENSMUST00000188013 759 ntBASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Gm6296-201ENSMUST00000222599 943 ntBASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Usp50Q6P8X6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.6■□□□□ 0.57
Usp50Q6P8X6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp50Q6P8X6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp50Q6P8X6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.6■□□□□ 0.57
Usp50Q6P8X6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.6■□□□□ 0.57
Usp50Q6P8X6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp50Q6P8X6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp50Q6P8X6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Usp50Q6P8X6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp50Q6P8X6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms