Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtl3Q6P1Y1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rtl3Q6P1Y1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtl3Q6P1Y1 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtl3Q6P1Y1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Birc2-201ENSMUST00000054878 378 ntBASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rtl3Q6P1Y1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Rtl3Q6P1Y1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Rtl3Q6P1Y1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Haglr-201ENSMUST00000100000 2085 ntBASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.7■□□□□ 0.26
Rtl3Q6P1Y1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Mzt1-203ENSMUST00000227948 952 ntBASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms