Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ChpfQ6IQX7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ChpfQ6IQX7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.33■□□□□ 0.36
ChpfQ6IQX7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ChpfQ6IQX7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ChpfQ6IQX7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ChpfQ6IQX7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ChpfQ6IQX7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Gm7222-201ENSMUST00000117512 906 ntBASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Gm13036-201ENSMUST00000117799 748 ntBASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChpfQ6IQX7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Gm14140-201ENSMUST00000119999 995 ntBASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChpfQ6IQX7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Gm27628-201ENSMUST00000184911 107 ntBASIC17.29■□□□□ 0.36
ChpfQ6IQX7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ChpfQ6IQX7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ChpfQ6IQX7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ChpfQ6IQX7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChpfQ6IQX7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChpfQ6IQX7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChpfQ6IQX7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ChpfQ6IQX7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.28■□□□□ 0.36
ChpfQ6IQX7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms