Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Gm13474-201ENSMUST00000122466 815 ntBASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Gm7213-201ENSMUST00000215977 950 ntBASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga7Q6DD96 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Gm18421-201ENSMUST00000204122 625 ntBASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga7Q6DD96 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga7Q6DD96 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms