Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn1Q64347 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn1Q64347 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn1Q64347 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn1Q64347 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Clcn1Q64347 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn1Q64347 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn1Q64347 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.45■□□□□ 0.86
Clcn1Q64347 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Gm13036-201ENSMUST00000117799 748 ntBASIC20.45■□□□□ 0.86
Clcn1Q64347 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn1Q64347 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.45■□□□□ 0.86
Clcn1Q64347 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.44■□□□□ 0.86
Clcn1Q64347 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Clcn1Q64347 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Clcn1Q64347 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Gm23935-201ENSMUST00000102303 57 ntBASIC20.44■□□□□ 0.86
Clcn1Q64347 Gm24270-201ENSMUST00000102326 57 ntBASIC20.44■□□□□ 0.86
Clcn1Q64347 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.44■□□□□ 0.86
Clcn1Q64347 Gm24245-201ENSMUST00000157318 57 ntBASIC20.44■□□□□ 0.86
Clcn1Q64347 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Clcn1Q64347 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.44■□□□□ 0.86
Clcn1Q64347 AV026068-213ENSMUST00000223675 1171 ntBASIC20.44■□□□□ 0.86
Clcn1Q64347 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.44■□□□□ 0.86
Clcn1Q64347 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.44■□□□□ 0.86
Clcn1Q64347 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn1Q64347 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Clcn1Q64347 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Clcn1Q64347 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Clcn1Q64347 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Clcn1Q64347 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.43■□□□□ 0.86
Clcn1Q64347 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.43■□□□□ 0.86
Clcn1Q64347 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Clcn1Q64347 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Clcn1Q64347 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.43■□□□□ 0.86
Clcn1Q64347 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn1Q64347 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn1Q64347 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn1Q64347 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.42■□□□□ 0.86
Clcn1Q64347 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.42■□□□□ 0.86
Clcn1Q64347 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn1Q64347 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn1Q64347 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn1Q64347 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn1Q64347 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.42■□□□□ 0.86
Clcn1Q64347 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn1Q64347 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.41■□□□□ 0.86
Clcn1Q64347 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Clcn1Q64347 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms