Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.37□□□□□ -0.27
Col7a1Q63870 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Col7a1Q63870 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.37□□□□□ -0.27
Col7a1Q63870 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col7a1Q63870 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.37□□□□□ -0.27
Col7a1Q63870 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.36□□□□□ -0.27
Col7a1Q63870 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Syt7-205ENSMUST00000224135 1557 ntBASIC13.36□□□□□ -0.27
Col7a1Q63870 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col7a1Q63870 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.36□□□□□ -0.27
Col7a1Q63870 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Col7a1Q63870 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Gm29541-201ENSMUST00000191351 678 ntBASIC13.36□□□□□ -0.27
Col7a1Q63870 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Col7a1Q63870 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.36□□□□□ -0.27
Col7a1Q63870 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col7a1Q63870 Gm9063-201ENSMUST00000223299 582 ntBASIC13.36□□□□□ -0.27
Col7a1Q63870 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.36□□□□□ -0.27
Col7a1Q63870 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col7a1Q63870 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col7a1Q63870 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col7a1Q63870 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col7a1Q63870 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col7a1Q63870 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.35□□□□□ -0.27
Col7a1Q63870 Gm18057-201ENSMUST00000208220 503 ntBASIC13.35□□□□□ -0.27
Col7a1Q63870 Gm18622-201ENSMUST00000219361 595 ntBASIC13.35□□□□□ -0.27
Col7a1Q63870 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Syt7-204ENSMUST00000223586 1344 ntBASIC13.35□□□□□ -0.27
Col7a1Q63870 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col7a1Q63870 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Col7a1Q63870 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.34□□□□□ -0.27
Col7a1Q63870 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col7a1Q63870 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.34□□□□□ -0.27
Col7a1Q63870 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col7a1Q63870 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col7a1Q63870 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col7a1Q63870 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.34□□□□□ -0.27
Col7a1Q63870 Gm15321-201ENSMUST00000121290 288 ntBASIC13.34□□□□□ -0.27
Col7a1Q63870 Gm9257-201ENSMUST00000221254 232 ntBASIC13.34□□□□□ -0.27
Col7a1Q63870 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col7a1Q63870 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col7a1Q63870 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.33□□□□□ -0.27
Col7a1Q63870 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Col7a1Q63870 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col7a1Q63870 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Col7a1Q63870 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col7a1Q63870 Gm27680-201ENSMUST00000184192 160 ntBASIC13.33□□□□□ -0.27
Col7a1Q63870 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.33□□□□□ -0.27
Col7a1Q63870 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.33□□□□□ -0.27
Col7a1Q63870 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col7a1Q63870 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col7a1Q63870 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm25144-201ENSMUST00000179561 110 ntBASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm25352-201ENSMUST00000179815 110 ntBASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm7775-201ENSMUST00000218871 853 ntBASIC13.33□□□□□ -0.28
Col7a1Q63870 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms