Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff3Q62395 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff3Q62395 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tff3Q62395 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff3Q62395 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff3Q62395 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff3Q62395 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff3Q62395 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff3Q62395 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Gm36967-201ENSMUST00000193814 266 ntBASIC14.02□□□□□ -0.17
Tff3Q62395 Gm7506-201ENSMUST00000207758 815 ntBASIC14.02□□□□□ -0.17
Tff3Q62395 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff3Q62395 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tff3Q62395 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tff3Q62395 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.01□□□□□ -0.17
Tff3Q62395 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tff3Q62395 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.01□□□□□ -0.17
Tff3Q62395 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.01□□□□□ -0.17
Tff3Q62395 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.01□□□□□ -0.17
Tff3Q62395 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tff3Q62395 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tff3Q62395 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tff3Q62395 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff3Q62395 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tff3Q62395 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Tff3Q62395 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Tff3Q62395 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14□□□□□ -0.17
Tff3Q62395 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Tff3Q62395 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Gm18195-201ENSMUST00000207604 706 ntBASIC14□□□□□ -0.17
Tff3Q62395 AC161829.1-201ENSMUST00000220298 281 ntBASIC14□□□□□ -0.17
Tff3Q62395 Gm6296-201ENSMUST00000222599 943 ntBASIC14□□□□□ -0.17
Tff3Q62395 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Tff3Q62395 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tff3Q62395 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff3Q62395 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff3Q62395 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff3Q62395 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tff3Q62395 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.99□□□□□ -0.17
Tff3Q62395 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Tff3Q62395 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tff3Q62395 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff3Q62395 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff3Q62395 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.99□□□□□ -0.17
Tff3Q62395 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff3Q62395 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms