Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Six2Q62232 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.29■□□□□ 0.36
Six2Q62232 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Six2Q62232 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Six2Q62232 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Six2Q62232 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.28■□□□□ 0.36
Six2Q62232 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.28■□□□□ 0.36
Six2Q62232 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.28■□□□□ 0.36
Six2Q62232 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.28■□□□□ 0.36
Six2Q62232 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six2Q62232 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Six2Q62232 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six2Q62232 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six2Q62232 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six2Q62232 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six2Q62232 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six2Q62232 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.26■□□□□ 0.35
Six2Q62232 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Six2Q62232 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Six2Q62232 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six2Q62232 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Six2Q62232 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Six2Q62232 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Six2Q62232 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Six2Q62232 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.25■□□□□ 0.35
Six2Q62232 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Gm6659-201ENSMUST00000174752 547 ntBASIC17.25■□□□□ 0.35
Six2Q62232 Mir7071-201ENSMUST00000184847 69 ntBASIC17.25■□□□□ 0.35
Six2Q62232 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Six2Q62232 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six2Q62232 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.24■□□□□ 0.35
Six2Q62232 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Six2Q62232 Gm11950-201ENSMUST00000121615 838 ntBASIC17.24■□□□□ 0.35
Six2Q62232 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.24■□□□□ 0.35
Six2Q62232 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Gm23634-201ENSMUST00000175071 91 ntBASIC17.24■□□□□ 0.35
Six2Q62232 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms