Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.62■□□□□ 0.25
Six1Q62231 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.62■□□□□ 0.25
Six1Q62231 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.62■□□□□ 0.25
Six1Q62231 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.62■□□□□ 0.25
Six1Q62231 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.62■□□□□ 0.25
Six1Q62231 Mir5130-201ENSMUST00000175160 84 ntBASIC16.62■□□□□ 0.25
Six1Q62231 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.62■□□□□ 0.25
Six1Q62231 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Six1Q62231 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six1Q62231 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Six1Q62231 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Six1Q62231 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.61■□□□□ 0.25
Six1Q62231 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Six1Q62231 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Six1Q62231 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six1Q62231 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Six1Q62231 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Six1Q62231 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.6■□□□□ 0.25
Six1Q62231 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.6■□□□□ 0.25
Six1Q62231 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.6■□□□□ 0.25
Six1Q62231 Gm43799-201ENSMUST00000201845 579 ntBASIC16.6■□□□□ 0.25
Six1Q62231 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.6■□□□□ 0.25
Six1Q62231 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.6■□□□□ 0.25
Six1Q62231 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.6■□□□□ 0.25
Six1Q62231 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six1Q62231 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.59■□□□□ 0.25
Six1Q62231 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.59■□□□□ 0.25
Six1Q62231 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.59■□□□□ 0.25
Six1Q62231 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.59■□□□□ 0.25
Six1Q62231 Gm37722-201ENSMUST00000193757 208 ntBASIC16.59■□□□□ 0.25
Six1Q62231 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.59■□□□□ 0.25
Six1Q62231 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Six1Q62231 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six1Q62231 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six1Q62231 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Six1Q62231 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.58■□□□□ 0.25
Six1Q62231 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six1Q62231 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six1Q62231 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Six1Q62231 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Six1Q62231 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms