Protein–RNA interactions for Protein: Q62189

Snrpa, U1 small nuclear ribonucleoprotein A, mousemouse

Known RBP Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpaQ62189 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SnrpaQ62189 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SnrpaQ62189 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SnrpaQ62189 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.3■□□□□ 0.2
SnrpaQ62189 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.3■□□□□ 0.2
SnrpaQ62189 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SnrpaQ62189 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.3■□□□□ 0.2
SnrpaQ62189 Gm10653-202ENSMUST00000139570 835 ntBASIC16.3■□□□□ 0.2
SnrpaQ62189 Gm44450-201ENSMUST00000199528 114 ntBASIC16.3■□□□□ 0.2
SnrpaQ62189 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SnrpaQ62189 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SnrpaQ62189 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.29■□□□□ 0.2
SnrpaQ62189 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.29■□□□□ 0.2
SnrpaQ62189 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.29■□□□□ 0.2
SnrpaQ62189 Gm715-201ENSMUST00000117865 831 ntBASIC16.29■□□□□ 0.2
SnrpaQ62189 Gm11539-201ENSMUST00000119837 557 ntBASIC16.29■□□□□ 0.2
SnrpaQ62189 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Gm27463-201ENSMUST00000183569 57 ntBASIC16.29■□□□□ 0.2
SnrpaQ62189 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.29■□□□□ 0.2
SnrpaQ62189 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.29■□□□□ 0.2
SnrpaQ62189 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SnrpaQ62189 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Gm13168-201ENSMUST00000121771 632 ntBASIC16.28■□□□□ 0.2
SnrpaQ62189 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.28■□□□□ 0.2
SnrpaQ62189 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.28■□□□□ 0.2
SnrpaQ62189 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.28■□□□□ 0.2
SnrpaQ62189 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SnrpaQ62189 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SnrpaQ62189 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.28■□□□□ 0.2
SnrpaQ62189 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SnrpaQ62189 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SnrpaQ62189 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SnrpaQ62189 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SnrpaQ62189 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SnrpaQ62189 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SnrpaQ62189 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SnrpaQ62189 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.27■□□□□ 0.2
SnrpaQ62189 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms