Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ecm1Q61508 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Gm37153-201ENSMUST00000193637 231 ntBASIC17.89■□□□□ 0.45
Ecm1Q61508 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.89■□□□□ 0.45
Ecm1Q61508 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.89■□□□□ 0.45
Ecm1Q61508 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.89■□□□□ 0.45
Ecm1Q61508 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ecm1Q61508 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ecm1Q61508 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ecm1Q61508 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ecm1Q61508 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.88■□□□□ 0.45
Ecm1Q61508 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.88■□□□□ 0.45
Ecm1Q61508 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.88■□□□□ 0.45
Ecm1Q61508 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ecm1Q61508 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ecm1Q61508 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.87■□□□□ 0.45
Ecm1Q61508 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ecm1Q61508 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.87■□□□□ 0.45
Ecm1Q61508 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Gm8344-201ENSMUST00000119813 856 ntBASIC17.87■□□□□ 0.45
Ecm1Q61508 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.87■□□□□ 0.45
Ecm1Q61508 Gm45167-201ENSMUST00000208007 322 ntBASIC17.87■□□□□ 0.45
Ecm1Q61508 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ecm1Q61508 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ecm1Q61508 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ecm1Q61508 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.86■□□□□ 0.45
Ecm1Q61508 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Ecm1Q61508 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.86■□□□□ 0.45
Ecm1Q61508 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.86■□□□□ 0.45
Ecm1Q61508 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.86■□□□□ 0.45
Ecm1Q61508 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.86■□□□□ 0.45
Ecm1Q61508 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ecm1Q61508 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.86■□□□□ 0.45
Ecm1Q61508 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ecm1Q61508 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ecm1Q61508 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms