Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.86■□□□□ 0.29
Smarcd1Q61466 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Mir6404-201ENSMUST00000183699 94 ntBASIC16.85■□□□□ 0.29
Smarcd1Q61466 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd1Q61466 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Gm25745-201ENSMUST00000174945 133 ntBASIC16.84■□□□□ 0.29
Smarcd1Q61466 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.84■□□□□ 0.29
Smarcd1Q61466 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd1Q61466 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcd1Q61466 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcd1Q61466 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcd1Q61466 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.83■□□□□ 0.28
Smarcd1Q61466 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.83■□□□□ 0.28
Smarcd1Q61466 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd1Q61466 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Gm25406-201ENSMUST00000157599 105 ntBASIC16.82■□□□□ 0.28
Smarcd1Q61466 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms