Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.96■□□□□ 0.47
Ift88Q61371 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.96■□□□□ 0.47
Ift88Q61371 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ift88Q61371 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ift88Q61371 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Ift88Q61371 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.96■□□□□ 0.46
Ift88Q61371 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ift88Q61371 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.95■□□□□ 0.46
Ift88Q61371 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.95■□□□□ 0.46
Ift88Q61371 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Ift88Q61371 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Gm36967-201ENSMUST00000193814 266 ntBASIC17.95■□□□□ 0.46
Ift88Q61371 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.95■□□□□ 0.46
Ift88Q61371 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ift88Q61371 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ift88Q61371 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Ift88Q61371 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ift88Q61371 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.95■□□□□ 0.46
Ift88Q61371 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ift88Q61371 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ift88Q61371 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.94■□□□□ 0.46
Ift88Q61371 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.94■□□□□ 0.46
Ift88Q61371 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ift88Q61371 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ift88Q61371 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ift88Q61371 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ift88Q61371 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ift88Q61371 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.93■□□□□ 0.46
Ift88Q61371 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ift88Q61371 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Gm10812-201ENSMUST00000099864 546 ntBASIC17.93■□□□□ 0.46
Ift88Q61371 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.93■□□□□ 0.46
Ift88Q61371 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms