Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Foxd1Q61345 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Foxd1Q61345 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.66■□□□□ 0.58
Foxd1Q61345 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Foxd1Q61345 Gm27628-201ENSMUST00000184911 107 ntBASIC18.66■□□□□ 0.58
Foxd1Q61345 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Gm43433-201ENSMUST00000196573 481 ntBASIC18.66■□□□□ 0.58
Foxd1Q61345 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.66■□□□□ 0.58
Foxd1Q61345 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.66■□□□□ 0.58
Foxd1Q61345 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Foxd1Q61345 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.66■□□□□ 0.58
Foxd1Q61345 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.66■□□□□ 0.58
Foxd1Q61345 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd1Q61345 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.65■□□□□ 0.58
Foxd1Q61345 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.65■□□□□ 0.58
Foxd1Q61345 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.65■□□□□ 0.58
Foxd1Q61345 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Foxd1Q61345 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd1Q61345 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.64■□□□□ 0.58
Foxd1Q61345 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Foxd1Q61345 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Foxd1Q61345 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Foxd1Q61345 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.64■□□□□ 0.57
Foxd1Q61345 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.64■□□□□ 0.57
Foxd1Q61345 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Foxd1Q61345 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.64■□□□□ 0.57
Foxd1Q61345 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.64■□□□□ 0.57
Foxd1Q61345 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxd1Q61345 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Foxd1Q61345 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.63■□□□□ 0.57
Foxd1Q61345 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.63■□□□□ 0.57
Foxd1Q61345 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
Foxd1Q61345 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.63■□□□□ 0.57
Foxd1Q61345 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Foxd1Q61345 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Foxd1Q61345 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.63■□□□□ 0.57
Foxd1Q61345 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Foxd1Q61345 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxd1Q61345 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxd1Q61345 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Foxd1Q61345 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxd1Q61345 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.62■□□□□ 0.57
Foxd1Q61345 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Foxd1Q61345 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Foxd1Q61345 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.62■□□□□ 0.57
Foxd1Q61345 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.62■□□□□ 0.57
Foxd1Q61345 Gm5866-201ENSMUST00000177881 973 ntBASIC18.62■□□□□ 0.57
Foxd1Q61345 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.62■□□□□ 0.57
Foxd1Q61345 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.62■□□□□ 0.57
Foxd1Q61345 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxd1Q61345 Gm18187-201ENSMUST00000196476 984 ntBASIC18.62■□□□□ 0.57
Foxd1Q61345 Gm44450-201ENSMUST00000199528 114 ntBASIC18.62■□□□□ 0.57
Foxd1Q61345 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.62■□□□□ 0.57
Foxd1Q61345 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxd1Q61345 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxd1Q61345 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxd1Q61345 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms