Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.18■□□□□ 0.34
FntaQ61239 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
FntaQ61239 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.18■□□□□ 0.34
FntaQ61239 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.18■□□□□ 0.34
FntaQ61239 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
FntaQ61239 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FntaQ61239 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FntaQ61239 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
FntaQ61239 Gm7791-201ENSMUST00000219066 539 ntBASIC17.17■□□□□ 0.34
FntaQ61239 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FntaQ61239 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FntaQ61239 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.17■□□□□ 0.34
FntaQ61239 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FntaQ61239 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.16■□□□□ 0.34
FntaQ61239 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
FntaQ61239 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
FntaQ61239 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FntaQ61239 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FntaQ61239 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
FntaQ61239 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
FntaQ61239 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
FntaQ61239 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.15■□□□□ 0.34
FntaQ61239 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.15■□□□□ 0.34
FntaQ61239 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FntaQ61239 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
FntaQ61239 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FntaQ61239 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
FntaQ61239 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
FntaQ61239 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
FntaQ61239 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FntaQ61239 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FntaQ61239 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
FntaQ61239 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FntaQ61239 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
FntaQ61239 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FntaQ61239 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.14■□□□□ 0.33
FntaQ61239 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FntaQ61239 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FntaQ61239 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FntaQ61239 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms