Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Gm37179-201ENSMUST00000194862 823 ntBASIC13.72□□□□□ -0.21
Scarb1Q61009 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.72□□□□□ -0.21
Scarb1Q61009 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Scarb1Q61009 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scarb1Q61009 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scarb1Q61009 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scarb1Q61009 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scarb1Q61009 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scarb1Q61009 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.71□□□□□ -0.21
Scarb1Q61009 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.71□□□□□ -0.21
Scarb1Q61009 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Scarb1Q61009 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scarb1Q61009 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.71□□□□□ -0.21
Scarb1Q61009 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.71□□□□□ -0.22
Scarb1Q61009 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Scarb1Q61009 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Scarb1Q61009 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scarb1Q61009 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.71□□□□□ -0.22
Scarb1Q61009 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Scarb1Q61009 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Scarb1Q61009 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.7□□□□□ -0.22
Scarb1Q61009 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Scarb1Q61009 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.7□□□□□ -0.22
Scarb1Q61009 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.7□□□□□ -0.22
Scarb1Q61009 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scarb1Q61009 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Scarb1Q61009 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.69□□□□□ -0.22
Scarb1Q61009 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scarb1Q61009 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Scarb1Q61009 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scarb1Q61009 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Scarb1Q61009 Gm27000-201ENSMUST00000182943 842 ntBASIC13.68□□□□□ -0.22
Scarb1Q61009 Gm27275-201ENSMUST00000184318 272 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms