Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a4Q60857 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a4Q60857 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a4Q60857 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Rps4l-201ENSMUST00000071745 943 ntBASIC16.55■□□□□ 0.24
Slc6a4Q60857 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.55■□□□□ 0.24
Slc6a4Q60857 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a4Q60857 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.54■□□□□ 0.24
Slc6a4Q60857 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a4Q60857 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Gm25406-201ENSMUST00000157599 105 ntBASIC16.53■□□□□ 0.24
Slc6a4Q60857 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Mir6404-201ENSMUST00000183699 94 ntBASIC16.53■□□□□ 0.24
Slc6a4Q60857 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.53■□□□□ 0.24
Slc6a4Q60857 Gm6376-201ENSMUST00000209407 580 ntBASIC16.53■□□□□ 0.24
Slc6a4Q60857 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.53■□□□□ 0.24
Slc6a4Q60857 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Slc6a4Q60857 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Slc6a4Q60857 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms