Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm13216-201ENSMUST00000117145 591 ntBASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Gm11594-201ENSMUST00000122313 162 ntBASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Gm27702-201ENSMUST00000184512 56 ntBASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scaf1Q5U4C3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scaf1Q5U4C3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scaf1Q5U4C3 Gm43598-201ENSMUST00000202482 2479 ntBASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Gm24513-201ENSMUST00000174964 138 ntBASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Scaf1Q5U4C3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Mir3113-201ENSMUST00000175478 76 ntBASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scaf1Q5U4C3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 AC127302.2-201ENSMUST00000215212 268 ntBASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 AC159295.1-201ENSMUST00000225326 940 ntBASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Scaf1Q5U4C3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scaf1Q5U4C3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms