Protein–RNA interactions for Protein: Q5U462

Cdcp1, CUB domain-containing protein 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdcp1Q5U462 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdcp1Q5U462 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdcp1Q5U462 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdcp1Q5U462 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdcp1Q5U462 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdcp1Q5U462 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdcp1Q5U462 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Gm8097-201ENSMUST00000117903 829 ntBASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdcp1Q5U462 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Gm25990-201ENSMUST00000102440 86 ntBASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Gm25406-201ENSMUST00000157599 105 ntBASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdcp1Q5U462 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Gm12350-201ENSMUST00000121208 462 ntBASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cdcp1Q5U462 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdcp1Q5U462 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdcp1Q5U462 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdcp1Q5U462 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdcp1Q5U462 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdcp1Q5U462 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cdcp1Q5U462 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.08■□□□□ 0.65
Cdcp1Q5U462 Gm15173-201ENSMUST00000122049 433 ntBASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Gm12497-201ENSMUST00000138778 237 ntBASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.08■□□□□ 0.64
Cdcp1Q5U462 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Gm1401-201ENSMUST00000122048 772 ntBASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.07■□□□□ 0.64
Cdcp1Q5U462 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms