Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.21■□□□□ 0.35
Shroom1Q5SX79 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom1Q5SX79 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.21■□□□□ 0.34
Shroom1Q5SX79 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shroom1Q5SX79 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom1Q5SX79 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.19■□□□□ 0.34
Shroom1Q5SX79 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Gm27867-201ENSMUST00000184778 125 ntBASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom1Q5SX79 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 AW822252-206ENSMUST00000208904 237 ntBASIC17.18■□□□□ 0.34
Shroom1Q5SX79 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom1Q5SX79 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Gm7862-201ENSMUST00000121461 292 ntBASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Gm6296-201ENSMUST00000222599 943 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms