Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm2213-201ENSMUST00000197485 688 ntBASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm6089-201ENSMUST00000197666 938 ntBASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm15590-201ENSMUST00000078419 552 ntBASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Gm6550-201ENSMUST00000187574 993 ntBASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 AV026068-213ENSMUST00000223675 1171 ntBASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav6-2Q5R1I4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-2Q5R1I4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-2Q5R1I4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-2Q5R1I4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trav6-2Q5R1I4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-2Q5R1I4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav6-2Q5R1I4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-2Q5R1I4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Psmb5-202ENSMUST00000227257 622 ntBASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav6-2Q5R1I4 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Gm11780-201ENSMUST00000136880 516 ntBASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms