Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Gm12644-201ENSMUST00000119935 606 ntBASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Gm27867-201ENSMUST00000184778 125 ntBASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Gm43347-201ENSMUST00000200226 580 ntBASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gm27459-201ENSMUST00000184860 107 ntBASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.59□□□□□ -0.23
Trav6d-4Q5R1I0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav6d-4Q5R1I0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-4Q5R1I0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav6d-4Q5R1I0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Trav6d-4Q5R1I0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-4Q5R1I0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms